IthaID: 342
Names and Sequences
| Functionality: | Globin gene causative mutation | Pathogenicity: | Pathogenic / Likely Pathogenic |
|---|---|---|---|
| Common Name: | Init CD ATG>ACG [Met>Thr] | HGVS Name: | HBA2:c.2T>C |
| Hb Name: | N/A | Protein Info: | α2 Initiation codon Met>Thr |
Context nucleotide sequence:
CCACAGACTCAGAGAGAACCCACCA [C/T] GGTGCTGTCTCCTGCCGACAAGACC (Strand: +)
Also known as:
We follow the HGVS sequence variant nomenclature and IUPAC standards.
Phenotype
| Hemoglobinopathy Group: | Thalassaemia |
|---|---|
| Hemoglobinopathy Subgroup: | α-thalassaemia |
| Allele Phenotype: | α⁺ |
| Associated Phenotypes: | Haemolytic anaemia [HP:0001878] |
Location
| Chromosome: | 16 |
|---|---|
| Locus: | NG_000006.1 |
| Locus Location: | 33777 |
| Size: | 1 bp |
| Located at: | α2 |
| Specific Location: | Exon 1 |
Other details
| Type of Mutation: | Point-Mutation(Substitution) |
|---|---|
| Effect on Gene/Protein Function: | Initiation codon (Translation) |
| Ethnic Origin: | Mediterranean |
| Molecular mechanism: | N/A |
| Inheritance: | Recessive |
| DNA Sequence Determined: | Yes |
In silico pathogenicity prediction
Publications / Origin
- Pirastu M, Saglio G, Chang JC, Cao A, Kan YW, Initiation codon mutation as a cause of alpha thalassemia., The Journal of biological chemistry, 259(20), 12315-7, 1984
Created on 2010-06-16 16:13:15,
Last reviewed on 2014-04-08 17:09:16 (Show full history)
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