IthaID: 3578
Names and Sequences
| Functionality: | Globin gene causative mutation | Pathogenicity: | N/A |
|---|---|---|---|
| Common Name: | 2.2 Mb deletion | HGVS Name: | NC_000011.10:g.4052720_6253287del |
| Hb Name: | N/A | Protein Info: | N/A |
| Also known as: |
We follow the
HGVS sequence variant nomenclature
and
IUPAC standards.
Comments: The de novo deletion was reported in a mixed European descent neonate presented with microcytic hemolytic anemia, hyperbilirubinemia, hypoglycemia and hypothermia. The propositus required two blood transfusions in the first two months of life. SNP microarray analysis identified a 2.2 Mb deletion containing 77 genes, including the entire β-globin gene cluster as well as the β-globin LCR, causing εγδβ thassaemia. The 5’ breakpoint is localised, at position 4052720 and the 3’ breakpoint is localized at position 6253287 (coordinates: GRCh38.p13, NC_000011.10).
External Links
No available links
Phenotype
| Hemoglobinopathy Group: | Thalassaemia |
|---|---|
| Hemoglobinopathy Subgroup: | εγδβ-thalassaemia |
| Allele Phenotype: | (εGγAγδβ)0 |
| Associated Phenotypes: | Haemolytic anaemia [HP:0001878] |
Other details
| Type of Mutation: | Deletion |
|---|---|
| Ethnic Origin: | European Caucasian |
| Molecular mechanism: | N/A |
| Inheritance: | Recessive |
| DNA Breakpoint Determined: | Yes |
In silico pathogenicity prediction
Sequence Viewer
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Publications / Origin
- Repnikova E, Roberts J, Mc Dermott S, Farooqi MS, Iqbal NT, Silvey M, Nolen J, Taboada E, Li W, Clinical and molecular characterization of novel deletions causing epsilon gamma delta beta thalassemia: Report of two cases., Pathol. Res. Pract., 215(10), 152578, 2019 PubMed
Created on 2020-03-17 11:08:02,
Last reviewed on (Show full history)
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