IthaID: 3997



Names and Sequences

Functionality: Globin gene causative mutation Pathogenicity: N/A
Common Name: 7.2 kb deletion HGVS Name: NC_000011.10:g.5222800-5230034del
Hb Name: N/A Protein Info: N/A

Also known as:

Comments: The deletion spans 7.2 kb on the β-globin gene cluster, removing all of the HBB gene, and was initially reported as a heterozygote in a Chinese proband, a 32-year-old male with abnormal values of routine hematological indices. MLPA result showed the deletion across 10 probes targeting HBB gene (deletion probes involved 10 probes between hg38 loc. 11p15.4: 5224905-5229846, including HBB-up, HBB-1, HBB-1 (WT) c., HBB-Intr.1, HBB-Intr.2, HBB-3 and HBB-down regions). TGS result showed the exact length of the deletion was 7.2 Kb (Chr11:5222800-5230034, hg38) located at HBB gene. Gap-PCR and Sanger sequencing validated the deletion breakpoints.

External Links

No available links

Phenotype

Hemoglobinopathy Group: Thalassaemia
Hemoglobinopathy Subgroup: β-thalassaemia
Allele Phenotype:β0
Associated Phenotypes: N/A

Location

Chromosome: 11
Locus: NG_000007.3
Locus Location: N/A
Size: 7.235 kb
Deletion involves: β

Other details

Type of Mutation: Deletion
Ethnic Origin: Chinese
Molecular mechanism: N/A
Inheritance: Recessive
DNA Breakpoint Determined: Yes

In silico pathogenicity prediction

Sequence Viewer

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Publications / Origin

  1. Zhong G, Zhong Z, Guan Z, Chen D, Wu Z, Yang K, Chen D, Liu Y, Xu R, Chen J, Case Report: The third-generation sequencing confirmed a novel 7.2 Kb deletion at β-globin gene in a patient with rare β-thalassemia., Front Genet, 13(0), 984996, 2022 PubMed
Created on 2023-01-12 11:16:22, Last reviewed on (Show full history)

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